Peptide Database

Peptide NameCyclotide mden-H

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length29 amino acids

Chemical FormulaC137H216N36O39S6

DescriptionStandard

        GIPICGETCFFGKCNTPKCTCNKPLCYKN
    

Molecular Weight3183.79 Da

Isoelectric Point (pI)8.65

Net Charge (pH 7.0)2.70

Net Charge (pH 7.4) 2.40

Charge Density (pH 7.0) 0.0931

GRAVY Index-0.19

Hydrophobic Moment 0.25

Boman Index0.03

Instability Index14.09

Aliphatic Index 40.34

Aromaticity 0.1034

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1865.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1203.32

LogP -13.31

H-bond Donors 45.0

H-bond Acceptors 48.0

Rotatable Bonds 100.0

Heavy Atoms 218.0

Ring Count 6.0

Amide Bonds 31.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0383218 VERIFIED: NO

Provenance & Taxonomy

OrganismMelicytus dentatus [Plant]

FamilyCyclotide

Structure & Mods

Configbackbone-cyclized cyclotide scaffold [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial