Peptide Database

Peptide NamepdBD-2

Function Ontology

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Standard StatusStandard

Sequence Length40 amino acids

Chemical FormulaC193H291N65O57S5

DescriptionStandard

        YDTGIQGWTCGSRGLCRKHCYAQEHTVGYHGCPRRYRCSS
    

Molecular Weight4594.10 Da

Isoelectric Point (pI)9.02

Net Charge (pH 7.0)3.97

Net Charge (pH 7.4) 3.53

Charge Density (pH 7.0) 0.0993

GRAVY Index-0.94

Hydrophobic Moment 0.61

Boman Index-0.22

Instability Index28.85

Aliphatic Index 29.25

Aromaticity 0.1250

Extinction Coeff. Reduced 11460.00

Extinction Coeff. Oxidized 11710.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1989.86

LogP -25.13

H-bond Donors 79.0

H-bond Acceptors 69.0

Rotatable Bonds 145.0

Heavy Atoms 320.0

Ring Count 10.0

Amide Bonds 41.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0033863 VERIFIED: YES

Provenance & Taxonomy

OrganismParamisgurnus dabryanus [Animal]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)