Peptide Database

Peptide NameS-type Pyocin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Anti-Gram-negative

Antimicrobial ▸ Antibiotic activity

Enzyme / Catalytic activity ▸ Hydrolase

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length608 amino acids

Chemical FormulaC2926H4570N794O888S18

DescriptionStandard

        MSKENDNAGAARLNDIGSGHDCFPETPITEGSPDVIINGQPAVRKGDTVLLHSCPCPNALHGVHSRKIAEGSSTVIINGKNAARIGDSINCGGVIISGSGNVIIGDTPYRSPVQECAKQAALSHAPILILSPMLTAPPVYAKSCLLDEGCTQAGTEKEPVEHFGEMVLFAQPEQNDCCGYGHHAADNTHEVVQHAQAAKKKTTVSETAISSPKLFPPKLPPQEPWYKTLFDLLVATDNKPLSQAPVTKSLTEPAAEEQKAPVASADVGLLAATGVMTQVWGEWSLGGVLSAARSVPYIGVLASALYIPSAGEGSDKVPGQEKCWLEEELRRKGWAGETATTRVRFFWRPDIHGKIQVYGVHTGEGTPYEGVRVANMVWDAKIQGYTFTPAPGRDGPTITWTPEKPEGSEPIAHTGSPVKPIDQPAILIYPIPEDETETTTPPFPVPDVHDFNDWILVFPDGSEIKPIYVYLQSARDKPGTVTGKGEVLSDEGKWLEAASLGLGAPVPTQVADKLRGQKFERFDDFREAFWLAVAECPELMVQFSPANKALIKKDRSPYAVPKEQSGRRTVFEIHHKIRIVDGGGVYDIDNMSIATLKRHITIHSKESS
    

Molecular Weight65655.55 Da

Isoelectric Point (pI)5.56

Net Charge (pH 7.0)-15.93

Net Charge (pH 7.4) -17.39

Charge Density (pH 7.0) -0.0262

GRAVY Index-0.31

Hydrophobic Moment 0.71

Boman Index0.05

Instability Index46.79

Aliphatic Index 79.26

Aromaticity 0.0691

Extinction Coeff. Reduced 81360.00

Extinction Coeff. Oxidized 81985.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0094738 VERIFIED: YES

Provenance & Taxonomy

OrganismPectobacterium polonicum [Bacterium]

FamilyPyocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Anti-Gram-negative Antibiotic Bacteriocin Hydrolase Non-hemolytic Non-ribosomal

TargetEscherichia coli (Gram-negative)