Peptide Database

Peptide NameCyclotide vitri peptide 6

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length30 amino acids

Chemical FormulaC147H207N39O47S6

DescriptionStandard

        GHYCGETCFFIPCASSLIDCECHNDYCYRN
    

Molecular Weight3464.84 Da

Isoelectric Point (pI)4.72

Net Charge (pH 7.0)-3.12

Net Charge (pH 7.4) -3.52

Charge Density (pH 7.0) -0.1040

GRAVY Index-0.18

Hydrophobic Moment 0.41

Boman Index0.06

Instability Index56.63

Aliphatic Index 42.33

Aromaticity 0.1667

Extinction Coeff. Reduced 4470.00

Extinction Coeff. Oxidized 4845.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1374.45

LogP -14.72

H-bond Donors 53.0

H-bond Acceptors 52.0

Rotatable Bonds 105.0

Heavy Atoms 239.0

Ring Count 8.0

Amide Bonds 31.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0333219 VERIFIED: NO

Provenance & Taxonomy

OrganismViola tricolor [Plant]

FamilyCyclotide

Structure & Mods

Confighead-to-tail cyclic peptide [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial

RECORD: Rec_0425697 VERIFIED: YES

Provenance & Taxonomy

OrganismViola tricolor [Plant]

FamilyCyclotide

Tax ID214053

Structure & Mods

Confighead-to-tail cyclic peptide [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

Disulfidemultiple disulfide bonds reported, sites not specified

Bio-Activity Profile

Function

Antimicrobial