Peptide Database

Peptide NameCycloviolacin VY1

Function Ontology

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Standard StatusStandard

Sequence Length27 amino acids

Chemical FormulaC120H197N33O36S6

DescriptionStandard

        CGESCVFIPCISAVLGCSCKSKVCYRN
    

Molecular Weight2870.44 Da

Isoelectric Point (pI)8.33

Net Charge (pH 7.0)1.70

Net Charge (pH 7.4) 1.40

Charge Density (pH 7.0) 0.0630

GRAVY Index0.70

Hydrophobic Moment 0.28

Boman Index0.15

Instability Index26.63

Aliphatic Index 79.26

Aromaticity 0.0741

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1865.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1106.61

LogP -13.10

H-bond Donors 45.0

H-bond Acceptors 44.0

Rotatable Bonds 92.0

Heavy Atoms 195.0

Ring Count 3.0

Amide Bonds 27.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0332199 VERIFIED: YES

Provenance & Taxonomy

OrganismGloeospermum blakeanum [Plant]

FamilyCyclotide

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)