Peptide Database

Peptide NameVdAMP3

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial

Standard StatusStandard

Sequence Length43 amino acids

Chemical FormulaC168H271N57O59S6

DescriptionStandard

        TTCQLGSIGPANAGNAACSASCLIQHGNIHGGHCNENAVCICN
    

Molecular Weight4225.69 Da

Isoelectric Point (pI)6.17

Net Charge (pH 7.0)-1.40

Net Charge (pH 7.4) -1.83

Charge Density (pH 7.0) -0.0325

GRAVY Index0.16

Hydrophobic Moment 0.34

Boman Index0.19

Instability Index41.96

Aliphatic Index 75.12

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 375.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1845.94

LogP -30.03

H-bond Donors 66.0

H-bond Acceptors 67.0

Rotatable Bonds 135.0

Heavy Atoms 290.0

Ring Count 4.0

Amide Bonds 50.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0125103 VERIFIED: YES

Provenance & Taxonomy

OrganismVerticillium dahliae [Fungus]

FamilyDefensin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibacterial