Peptide Database

Peptide NameLysozyme (EC 3.2.1.17)

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Bacteriolytic activity ▸ Bacteriolytic enzyme

Enzyme / Catalytic activity ▸ Hydrolase

Enzyme / Catalytic activity ▸ Hydrolase ▸ Glycosidase

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length187 amino acids

Chemical FormulaC906H1444N286O252S4

DescriptionStandard

        MDLSAVGRAVLIAREGRRLEAYRDSVGVWTIGIGHTAAAGPPMPRAGLRIEAGEADAIFTRDVAAFVRTVAETVPEPLPQHAFDALVSLCFNIGPAAFRRSTVLRRLRAGDRAGAGEAILMWNRPAAIIPRRQGEFDQFRTPYETTLPRARRSDAQPVAAPVERPSSPSSARPGWRARLWDWLRAGR
    

Molecular Weight20503.18 Da

Isoelectric Point (pI)11.35

Net Charge (pH 7.0)8.70

Net Charge (pH 7.4) 8.34

Charge Density (pH 7.0) 0.0465

GRAVY Index-0.26

Hydrophobic Moment 0.69

Boman Index-0.06

Instability Index63.07

Aliphatic Index 81.07

Aromaticity 0.0749

Extinction Coeff. Reduced 30480.00

Extinction Coeff. Oxidized 30480.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 8576.63

LogP -99.86

H-bond Donors 309.0

H-bond Acceptors 267.0

Rotatable Bonds 649.0

Heavy Atoms 1448.0

Ring Count 37.0

Amide Bonds 192.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0154839 VERIFIED: NO

Provenance & Taxonomy

OrganismMethylorubrum extorquens [Bacterium]

FamilyGlycosyl hydrolase 24

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Bacteriolytic enzyme Glycosidase Hydrolase Non-hemolytic