Peptide Database

Peptide NameVv-AMP1

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Anti-Gram-negative

Standard StatusStandard

Sequence Length27 amino acids

Chemical FormulaC121H203N41O40S4

DescriptionStandard

        RTCESQSHKFKGLCVRASNCANVCKTE
    

Molecular Weight3000.42 Da

Isoelectric Point (pI)8.92

Net Charge (pH 7.0)2.82

Net Charge (pH 7.4) 2.49

Charge Density (pH 7.0) 0.1043

GRAVY Index-0.63

Hydrophobic Moment 0.42

Boman Index-0.27

Instability Index43.50

Aliphatic Index 43.33

Aromaticity 0.0370

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 250.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1355.48

LogP -19.64

H-bond Donors 52.0

H-bond Acceptors 48.0

Rotatable Bonds 103.0

Heavy Atoms 206.0

Ring Count 2.0

Amide Bonds 29.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0107213 VERIFIED: YES

Provenance & Taxonomy

OrganismAsparagus officinalis [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Anti-Gram-negative

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)