Peptide Database

Peptide NameS-type Pyocin (EC 3.1.-.-)

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Enzyme / Catalytic activity ▸ Hydrolase

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length620 amino acids

Chemical FormulaC2885H4627N851O892S10

DescriptionStandard

        MARKKRQVILPPTYVGAQPSRPGASAPGGSVANHVGPILEGFQISAAGAMKIADDAARVVYLESLSALVGRLEQEIAIVRKKRGGAQLSHIESLQEDIAARSVLLGRKTADLELQQTQANSYYGASPFGRKPEEYAHATFRNIATGLIKITSAQEALNAAYRAAYMVQLREAEIQMLQAQIAALQQALHTAQEQLRAEAEAQARAKAEAEAAARAKAEAEAAARAKAEAEAAARAQAEAEAVARAQAEAEATRLANTFTMSGAAAVGGPLVVTALGHVVSTALNFSLSVSMGAALAGLRGAAGVAVPFVAGAAALVYSSRLGNGELQERYVLQMPLDTLDPQLSLALAPGNAIGSHAELPFRLSSQATEADDSEILVVKTDGQVVPSQVRVLAATHDRQHNLYRVTTADVPSRTFTWTPIAQADNASTGLPAEQPELAVYEGATLNPVEVRLDGYPGVADASLDDYIIVFPADSGLPPLYVMFRDRREESGTMTGFGQPDATVWLAGANQGQGVAIPPRIADKLRGRNFSSWRRAREAIWTAVSEDPVLMSQFSKSNQTLLRNGYSPSAIPSEHAGSNRAFEIHHVIPLKDGGAVYDIDNLRITTPKNHVRIHRNKGADQ
    

Molecular Weight65826.42 Da

Isoelectric Point (pI)6.27

Net Charge (pH 7.0)-4.26

Net Charge (pH 7.4) -5.27

Charge Density (pH 7.0) -0.0069

GRAVY Index-0.16

Hydrophobic Moment 0.73

Boman Index0.03

Instability Index40.65

Aliphatic Index 89.13

Aromaticity 0.0548

Extinction Coeff. Reduced 45840.00

Extinction Coeff. Oxidized 45840.00

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Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0103772 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas putida [Bacterium]

FamilyColicin/Bacteriocin

Structure & Mods

Configlinear polypeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antibiotic Antimicrobial Bacteriocin Hydrolase Non-hemolytic

MethodQualitative functional evidence