Peptide Database

Peptide NameAntimicrobial peptide 2

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial

Standard StatusStandard

Sequence Length6 amino acids

Chemical FormulaC28H40N8O7

DescriptionStandard

        AGHAVF
    

Molecular Weight600.67 Da

Isoelectric Point (pI)6.79

Net Charge (pH 7.0)-0.12

Net Charge (pH 7.4) -0.36

Charge Density (pH 7.0) -0.0195

GRAVY Index1.17

Hydrophobic Moment 0.32

Boman Index0.60

Instability Index8.33

Aliphatic Index 81.67

Aromaticity 0.1667

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 237.50

LogP -1.64

H-bond Donors 8.0

H-bond Acceptors 8.0

Rotatable Bonds 16.0

Heavy Atoms 43.0

Ring Count 2.0

Amide Bonds 5.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0301366 VERIFIED: NO

Provenance & Taxonomy

OrganismPorphyra yezoensis [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibacterial

TargetStaphylococcus aureus