Peptide Database

Peptide NamePeptide chain B in PDB 1B8Q

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length7 amino acids

Chemical FormulaC33H60N8O11

DescriptionStandard

        VVKVDSV
    

Molecular Weight744.88 Da

Isoelectric Point (pI)5.81

Net Charge (pH 7.0)-0.27

Net Charge (pH 7.4) -0.48

Charge Density (pH 7.0) -0.0380

GRAVY Index1.23

Hydrophobic Moment 0.29

Boman Index0.25

Instability Index-1.63

Aliphatic Index 165.71

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 321.47

LogP -2.47

H-bond Donors 11.0

H-bond Acceptors 11.0

Rotatable Bonds 24.0

Heavy Atoms 52.0

Ring Count 0.0

Amide Bonds 6.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0063120 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 1B8Q receptor chain A

MethodProtein-peptide complex structure