Peptide Database

Peptide NameColicin transporter

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length682 amino acids

Chemical FormulaC3252H5156N886O1030S11

DescriptionStandard

        MPQNVVTLPPTIVTPDQPLPRPLGPLPGAGVVARPLRWDGTIPANHEIDAFFSKRGIRNEHYRMSVIMTAFSTQQSIDQSYIESLPFLPADVDAEISAAVGHYNLPELETAKFEKNVVDSLMSQSAAELAKSNERAHAFFGRHVLAVEIKKSSVDFLNIFQTRRDLGSPLEVYKSWEASVAAAYRAKILEEKIRILTERSVSLSQLIAAAQAKEDARLAAEAELTRLAVEAAEQARLAAEVEAQRIAAETAEHARVVAEAEAKRVADEQALFAAEAEAHRIAAEAAEQARMEAEAQAQRDADEHARVTAEAQALEAGKTLRLPEAGTPQLGAVAGVISVTAGSGLFLDATIQAAIEILAALVGTAVSSTTAVGIGTLLYSPSLGNGELPGRMLDLPARVLMPDLPDVLNDVAATGGTVDMPYRIYGDQSKYSVVATQPEGGFSPKVPVRALILDPVANAYTFTTSDTPPITLTFPIAAPENSSTTTVAQPIETPAYTGITLEPIEVKAEPLPATSPLDIRDAIYVYPVNSGLPPVYVVFSSPYEGATTKGEHSGRMYDPDNAGGPTQNLDWTTASVTQNGIDLVKLHTGRFEPSDANAVMIDRLEKILRSELSMTDTDKRFYTHELRELERYRALGVADGVEGEVWNNAHTATLEDYKLKDSSESFYTPEAITAENKQVYGE
    

Molecular Weight73497.76 Da

Isoelectric Point (pI)4.79

Net Charge (pH 7.0)-35.28

Net Charge (pH 7.4) -36.30

Charge Density (pH 7.0) -0.0517

GRAVY Index-0.18

Hydrophobic Moment 0.78

Boman Index0.05

Instability Index41.85

Aliphatic Index 89.38

Aromaticity 0.0630

Extinction Coeff. Reduced 53290.00

Extinction Coeff. Oxidized 53290.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0049951 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas syringae [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Non-hemolytic Non-ribosomal

RECORD: Rec_0184648 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas syringae pv. berberidis [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Non-hemolytic Non-ribosomal

RECORD: Rec_0249732 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas syringae pv. tomato [Bacterium]

FamilyPyocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Non-hemolytic Non-ribosomal