Peptide Database

Peptide NameColicin-D

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Anti-Gram-negative

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length295 amino acids

Chemical FormulaC1393H2226N378O429S4

DescriptionStandard

        TAGPMVAAASAILFSPAAGGGSDRVPGRDLNAMFALNAQLLAGPDVKIEPGATSVNLPERGHLVNSNGQMALQLLKTGDTLPAAVPVLNAVRDAATGLDRITVPAVAGAPERTILVNPAPSPAAPSDTASPPPSVPVTPVHTGTEIKPVETITVTTTPAADIGGLQDFIYWRPDAAGTGVEPVYVMLNDPLDSGRFTRKQLDKKYLKHASDFGIDDTKKNRETLTKFRDVIEAHLIDKETIKKGTYLPEKDSEVFFNSKTNNVVILNKDGNFVSGWKLTPGTPQYDVYTKTGNLK
    

Molecular Weight31261.11 Da

Isoelectric Point (pI)6.10

Net Charge (pH 7.0)-2.22

Net Charge (pH 7.4) -2.69

Charge Density (pH 7.0) -0.0075

GRAVY Index-0.23

Hydrophobic Moment 0.77

Boman Index0.05

Instability Index36.05

Aliphatic Index 85.32

Aromaticity 0.0576

Extinction Coeff. Reduced 19940.00

Extinction Coeff. Oxidized 19940.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0158978 VERIFIED: YES

Provenance & Taxonomy

OrganismSalmonella enterica [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Anti-Gram-negative Antibiotic Bacteriocin Non-hemolytic Non-ribosomal

TargetEscherichia coli (Gram-negative)