Peptide Database

Peptide NameParigidin-br1

Function Ontology

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Standard StatusStandard

Sequence Length32 amino acids

Chemical FormulaC142H233N39O43S6

DescriptionStandard

        NGVIPCGESCVFIPCISSVIGCSCKSKVCYRN
    

Molecular Weight3366.99 Da

Isoelectric Point (pI)8.33

Net Charge (pH 7.0)1.70

Net Charge (pH 7.4) 1.40

Charge Density (pH 7.0) 0.0531

GRAVY Index0.63

Hydrophobic Moment 0.37

Boman Index0.19

Instability Index22.10

Aliphatic Index 85.00

Aromaticity 0.0625

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1865.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1306.64

LogP -15.99

H-bond Donors 51.0

H-bond Acceptors 51.0

Rotatable Bonds 107.0

Heavy Atoms 230.0

Ring Count 4.0

Amide Bonds 33.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0247445 VERIFIED: YES

Provenance & Taxonomy

OrganismViola baoshanensis [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)