Peptide Database

Peptide NameBaseplate central spike protein (Peptidoglycan hydrolase) (EC 3.2.1.17)

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Bacteriolytic activity ▸ Bacteriolytic enzyme

Enzyme / Catalytic activity ▸ Hydrolase

Enzyme / Catalytic activity ▸ Hydrolase ▸ Glycosidase

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length584 amino acids

Chemical FormulaC2804H4403N781O899S24

DescriptionStandard

        MINVYDKISWFVGVVEDRMDPLKQGRVRVRVWGLHPYEKIQGPVKGIKTEDLPWMSVLQPTSSASVSGVQQSITGMVPGTNVYGHFLDEWKMNGLVIGTYSSNSQIKPNPNEGFSDPTGQYPLYLGNDTSQLNRGGEVGDTAPSNTIQNANLDLGLSPDGRPLSEIPEDNDPDYTIQAMLQRDEGLRLKVYWDTEGFPTIGIGHLISPQPIRDMTQINRILSQQVGREVTGNPGAISMDEASKLFQEDLAKMQRDIKQNSKTGPVYAKMNKSRQLALENMAFQLGVGGLSDFTNMLNAMFIGDWQTAYKEGRDSLWFNQTKGRASRVTMIILTGNLESYGIMAPANAPTPPPGQGLMRMALMSESVAKESNPADPWVPEDTRILFKEPESSYKGVYPYVQTMTTEGGHIQEFDNTPGQERYRKIHPTGSYEEVAPDGRRTIKTVADDYYMVQGDASIMNSGDRKVNIGGDEIKYNMANVRRQTDGSETIFIRGNETKTIEGNGTLHVKGNITIIVEGNADITVQGNATTLIEGDQTNTVNGNLTWSVAGTVDWQVGGSWTETMASMSSIANGSYTIDGSRIDIG
    

Molecular Weight64208.21 Da

Isoelectric Point (pI)4.93

Net Charge (pH 7.0)-17.89

Net Charge (pH 7.4) -18.56

Charge Density (pH 7.0) -0.0306

GRAVY Index-0.51

Hydrophobic Moment 0.72

Boman Index-0.01

Instability Index33.49

Aliphatic Index 73.25

Aromaticity 0.0736

Extinction Coeff. Reduced 90300.00

Extinction Coeff. Oxidized 90300.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0109694 VERIFIED: YES

Provenance & Taxonomy

OrganismPectobacterium bacteriophage PM2 [Virus]

FamilyGlycosyl hydrolase 24

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Bacteriolytic enzyme Glycosidase Hydrolase Non-hemolytic