Peptide Database

Peptide NamePeptide chain B in PDB 5KVM

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length9 amino acids

Chemical FormulaC49H75N9O13S

DescriptionStandard

        TYFAVLMVS
    

Molecular Weight1030.24 Da

Isoelectric Point (pI)5.18

Net Charge (pH 7.0)-0.60

Net Charge (pH 7.4) -0.79

Charge Density (pH 7.0) -0.0670

GRAVY Index1.77

Hydrophobic Moment 0.05

Boman Index0.63

Instability Index8.89

Aliphatic Index 118.89

Aromaticity 0.2222

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 356.81

LogP -1.03

H-bond Donors 13.0

H-bond Acceptors 14.0

Rotatable Bonds 30.0

Heavy Atoms 72.0

Ring Count 2.0

Amide Bonds 8.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0109955 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5KVM receptor chain A

MethodProtein-peptide complex structure