Peptide Database

Peptide NameWAMP-1a

Function Ontology

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Standard StatusStandard

Sequence Length42 amino acids

Chemical FormulaC165H253N49O61S9

DescriptionStandard

        AEQCGTQAGGALCPNCLCCSKFGWCGTTSDYCGSGCQSQCTG
    

Molecular Weight4187.65 Da

Isoelectric Point (pI)4.37

Net Charge (pH 7.0)-1.29

Net Charge (pH 7.4) -1.62

Charge Density (pH 7.0) -0.0307

GRAVY Index-0.07

Hydrophobic Moment 0.29

Boman Index0.11

Instability Index36.25

Aliphatic Index 25.71

Aromaticity 0.0714

Extinction Coeff. Reduced 6990.00

Extinction Coeff. Oxidized 7490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1761.56

LogP -29.83

H-bond Donors 69.0

H-bond Acceptors 69.0

Rotatable Bonds 132.0

Heavy Atoms 284.0

Ring Count 5.0

Amide Bonds 46.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0027343 VERIFIED: YES

Provenance & Taxonomy

OrganismSaccharum officinarum [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)