Peptide Database

Peptide NameLysin A

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Bacteriolytic activity ▸ Bacteriolytic enzyme

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length344 amino acids

Chemical FormulaC1675H2502N480O480S7

DescriptionStandard

        MADPVWLPDVLRAAGLRCDVWPGAFDNGHGDFGNIWGIVAHHTGSNGAGPGGIAHHPDLGLASQLHLSRTGVFTLCGVGIAYHAGQGSWPGLPTNNANQYTIGIEAANDGTSGWPAAQYDAYVRGCAAILKRLGHNSSRVIGHKEWGAIQGKWDPGGIDMKRFRNDVAAAMNSKPAPVVNLIDQEAYEARAWIGKRITKGENKCPDGKGRWAEFENAHIYWHPNTGAHAIPHADPNIPGSGLFETWGKDYGWETGVLGYPVRDFAVLKDGAVQAFSGGVLYRKNGSAKGYFVKGVIGKRWADEKYEEGPSGYPVSNEYEHDKIGRIQDFEHNSLLWHPSNAVKL
    

Molecular Weight37267.17 Da

Isoelectric Point (pI)6.76

Net Charge (pH 7.0)-1.11

Net Charge (pH 7.4) -2.28

Charge Density (pH 7.0) -0.0032

GRAVY Index-0.45

Hydrophobic Moment 0.74

Boman Index0.06

Instability Index24.12

Aliphatic Index 70.70

Aromaticity 0.1076

Extinction Coeff. Reduced 96370.00

Extinction Coeff. Oxidized 96620.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0257919 VERIFIED: NO

Provenance & Taxonomy

OrganismGordonia phage Ziko [Virus]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Bacteriolytic enzyme Non-hemolytic Non-ribosomal

RECORD: Rec_0298290 VERIFIED: NO

Provenance & Taxonomy

OrganismGordonia phage Ronaldo [Virus]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Bacteriolytic enzyme Non-hemolytic Non-ribosomal

RECORD: Rec_0388075 VERIFIED: NO

Provenance & Taxonomy

OrganismGordonia phage Fryberger [Virus]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Bacteriolytic enzyme Non-hemolytic Non-ribosomal

RECORD: Rec_0415139 VERIFIED: NO

Provenance & Taxonomy

OrganismGordonia phage Volt [Virus]

Structure & Mods

Configlinear polypeptide/propeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Bacteriolytic enzyme Non-hemolytic Non-ribosomal