Peptide Database

Peptide NamePp-AMP1

Function Ontology

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Standard StatusStandard

Sequence Length41 amino acids

Chemical FormulaC176H292N56O56S6

DescriptionStandard

        KSCCPSTTARNIYNTCRFAGSPRPVCASLSGCKNISGTKCP
    

Molecular Weight4280.93 Da

Isoelectric Point (pI)9.38

Net Charge (pH 7.0)5.70

Net Charge (pH 7.4) 5.40

Charge Density (pH 7.0) 0.1389

GRAVY Index-0.29

Hydrophobic Moment 0.66

Boman Index-0.09

Instability Index70.38

Aliphatic Index 42.93

Aromaticity 0.0488

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1865.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1807.72

LogP -28.39

H-bond Donors 70.0

H-bond Acceptors 68.0

Rotatable Bonds 134.0

Heavy Atoms 294.0

Ring Count 6.0

Amide Bonds 43.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0422781 VERIFIED: YES

Provenance & Taxonomy

OrganismCamelina sativa [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)