Peptide Database

Peptide NameCyclotide Oak6 (Fragment)

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length153 amino acids

Chemical FormulaC703H1140N188O213S17

DescriptionStandard

        KSLVLCLLLAAFVGAFGAELSEADKANVVNEIAANIQREILKGVKTSETTLTMFLKEMQLKGLPVCGETCFGGTCNTPGCACDPWPVCTRNGLPRRAGVKSSETTLTMFLKEMQLKGLPICGETCFGGTCNTPGCICDPWPVCTRDGLPDVAA
    

Molecular Weight16178.81 Da

Isoelectric Point (pI)5.49

Net Charge (pH 7.0)-1.34

Net Charge (pH 7.4) -1.77

Charge Density (pH 7.0) -0.0088

GRAVY Index0.18

Hydrophobic Moment 0.78

Boman Index0.13

Instability Index33.38

Aliphatic Index 82.88

Aromaticity 0.0523

Extinction Coeff. Reduced 11000.00

Extinction Coeff. Oxidized 11750.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 6325.79

LogP -66.71

H-bond Donors 227.0

H-bond Acceptors 229.0

Rotatable Bonds 527.0

Heavy Atoms 1121.0

Ring Count 20.0

Amide Bonds 161.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0247873 VERIFIED: NO

Provenance & Taxonomy

OrganismOldenlandia affinis [Plant]

FamilyCyclotide

Structure & Mods

ConfigBackbone-cyclized cyclotide scaffold with cystine-knot family annotation [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial