Peptide Database

Peptide NamePeptide chain P in PDB 3VCM

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length38 amino acids

Chemical FormulaC202H336N62O53S3

DescriptionStandard

        TTFKRIFLKRMPSIRESLKERGVDMARLGPEWSQPMKR
    

Molecular Weight4577.41 Da

Isoelectric Point (pI)11.38

Net Charge (pH 7.0)5.40

Net Charge (pH 7.4) 5.20

Charge Density (pH 7.0) 0.1422

GRAVY Index-0.86

Hydrophobic Moment 0.59

Boman Index-0.31

Instability Index57.83

Aliphatic Index 61.58

Aromaticity 0.0789

Extinction Coeff. Reduced 5500.00

Extinction Coeff. Oxidized 5500.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1898.36

LogP -16.34

H-bond Donors 69.0

H-bond Acceptors 62.0

Rotatable Bonds 157.0

Heavy Atoms 320.0

Ring Count 7.0

Amide Bonds 38.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0399208 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 3VCM receptor chain A

MethodProtein-peptide complex structure