Peptide Database

Peptide NameGarvicin C

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length51 amino acids

Chemical FormulaC232H354N68O68S2

DescriptionStandard

        HWIGDVLGAIGGAAHPVNPQKVVDQLNGKPAIKPHSCSPYGTGGTPNSCNW
    

Molecular Weight5247.84 Da

Isoelectric Point (pI)8.05

Net Charge (pH 7.0)1.00

Net Charge (pH 7.4) 0.61

Charge Density (pH 7.0) 0.0196

GRAVY Index-0.37

Hydrophobic Moment 0.43

Boman Index0.14

Instability Index18.15

Aliphatic Index 68.82

Aromaticity 0.0588

Extinction Coeff. Reduced 12490.00

Extinction Coeff. Oxidized 12615.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 2115.78

LogP -25.08

H-bond Donors 70.0

H-bond Acceptors 74.0

Rotatable Bonds 158.0

Heavy Atoms 370.0

Ring Count 14.0

Amide Bonds 56.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0404586 VERIFIED: YES

Provenance & Taxonomy

OrganismLactococcus garvieae [Bacterium]

FamilyBacteriocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial

TargetL. garvieae IBB3403