Peptide Database

Peptide NameAc-AMP2

Function Ontology

—

Standard StatusStandard

Sequence Length29 amino acids

Chemical FormulaC124H193N41O38S7

DescriptionStandard

        GECVQGRCPSGMCCSQFGYCGRGPKYCGR
    

Molecular Weight3090.57 Da

Isoelectric Point (pI)8.67

Net Charge (pH 7.0)2.70

Net Charge (pH 7.4) 2.40

Charge Density (pH 7.0) 0.0931

GRAVY Index-0.49

Hydrophobic Moment 0.62

Boman Index-0.11

Instability Index31.08

Aliphatic Index 10.00

Aromaticity 0.1034

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 3355.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1276.66

LogP -18.17

H-bond Donors 51.0

H-bond Acceptors 48.0

Rotatable Bonds 98.0

Heavy Atoms 210.0

Ring Count 5.0

Amide Bonds 30.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0392864 VERIFIED: YES

Provenance & Taxonomy

OrganismAmaranthus retroflexus [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)