Peptide Database

Peptide NameToxin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length409 amino acids

Chemical FormulaC1985H3107N557O590S8

DescriptionStandard

        MATRKKDIPQVRNPPGGDGHYVTYRDMTASELAEREARQQAYEAMLARQAAYERERWATLDKKPVLSVAGSVFAKSCKLPNGIIDYNNPNGYVPADLVKQYGDLMWLGGRSADPSGTIPLKRIGAGTVPVTLGRLALGGSATSTAGAVGGTVGAALLTGIVALLWPSSLGDSALYSEDQLRHLKQARSRMRLSIEQQADGSLKGYGFYTGQNRGWEMVDVVQFTPRADQFIADLGDGIELIWSPAIDPSDTLGIPALEAAPQAPNIWIYPPTPVADSIIVDPIYPPEYKDFILVFPADSGVRPVYVVLSVRRKGMAETGHDYHPAPKTHEITGFPGLRKGVKKTPVQGGGGLRQRWLDAKGRTIYEWDSSHGELEAYRSSDGSHLGAFDHITGEQTDGPKKNRNIKKYL
    

Molecular Weight44470.80 Da

Isoelectric Point (pI)8.37

Net Charge (pH 7.0)2.23

Net Charge (pH 7.4) 1.49

Charge Density (pH 7.0) 0.0055

GRAVY Index-0.39

Hydrophobic Moment 0.61

Boman Index0.01

Instability Index42.71

Aliphatic Index 80.66

Aromaticity 0.0831

Extinction Coeff. Reduced 70820.00

Extinction Coeff. Oxidized 70820.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0391213 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas brassicacearum [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Non-hemolytic Non-ribosomal