Peptide Database

Peptide NamePeptide chain D in PDB 4QC1

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length7 amino acids

Chemical FormulaC29H52N12O9

DescriptionStandard

        GGAPRKQ
    

Molecular Weight712.80 Da

Isoelectric Point (pI)11.00

Net Charge (pH 7.0)1.76

Net Charge (pH 7.4) 1.55

Charge Density (pH 7.0) 0.2513

GRAVY Index-1.79

Hydrophobic Moment 0.25

Boman Index-0.45

Instability Index64.59

Aliphatic Index 14.29

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 360.14

LogP -5.25

H-bond Donors 12.0

H-bond Acceptors 11.0

Rotatable Bonds 23.0

Heavy Atoms 50.0

Ring Count 1.0

Amide Bonds 7.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0160905 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 4QC1 receptor chain A

MethodProtein-peptide complex structure