Peptide Database

Peptide NameCytochrome oxidase subunit II, partial (mitochondrion)

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length65 amino acids

Chemical FormulaC327H506N84O92S5

DescriptionStandard

        VPSLGGKCDAIPGRLNQTSMFVKREGLYYGQCSEICGINHGFMPILVEAVPLPNYITWIYNKLND
    

Molecular Weight7246.35 Da

Isoelectric Point (pI)6.72

Net Charge (pH 7.0)-0.20

Net Charge (pH 7.4) -0.53

Charge Density (pH 7.0) -0.0031

GRAVY Index0.01

Hydrophobic Moment 0.45

Boman Index0.16

Instability Index40.43

Aliphatic Index 92.92

Aromaticity 0.1077

Extinction Coeff. Reduced 11460.00

Extinction Coeff. Oxidized 11585.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 2798.30

LogP -23.04

H-bond Donors 96.0

H-bond Acceptors 98.0

Rotatable Bonds 231.0

Heavy Atoms 508.0

Ring Count 14.0

Amide Bonds 71.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0133809 VERIFIED: NO

Provenance & Taxonomy

OrganismPalmaria palmata [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial