Peptide Database

Peptide NamePeptide chain A in PDB 3HYM

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length25 amino acids

Chemical FormulaC138H235N41O42

DescriptionStandard

        LRRKPTRLELKLDDIEEFENIRKDL
    

Molecular Weight3140.59 Da

Isoelectric Point (pI)6.35

Net Charge (pH 7.0)-0.23

Net Charge (pH 7.4) -0.44

Charge Density (pH 7.0) -0.0091

GRAVY Index-1.17

Hydrophobic Moment 0.54

Boman Index-0.47

Instability Index78.60

Aliphatic Index 109.20

Aromaticity 0.0400

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1403.01

LogP -10.32

H-bond Donors 49.0

H-bond Acceptors 42.0

Rotatable Bonds 113.0

Heavy Atoms 221.0

Ring Count 2.0

Amide Bonds 25.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0421073 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 3HYM receptor chain B

MethodProtein-peptide complex structure