Peptide Database

Peptide NamePeptidoglycan-binding LysM

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Bacteriolytic activity ▸ Bacteriolytic enzyme

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length568 amino acids

Chemical FormulaC2803H4408N790O829S15

DescriptionStandard

        MAKSNHTNDALSAVTVYFKDHFGQPIQNLKVEIKGMEERLDHVYHTASTNAQGAVEFSVRMGEALSVHVKRWTSDSMKEVARLDAALSQIKFHLTSPKTLHDLPTKTDDGAGGDYWRGTYKVKAHDNLTVIARKYHTSVDLLKHVNHLKSDLIVVGQVLKVPPVDSRKSDAPAPKKPDPKGAPPKNDHDNNDRGAPTTTPRKGGAPIIFPIQTRPLNDEGGKYGDCPWVKPLGAGGLNLARFGTPREQGRRKHAARDLYVDAYTPIVAIAPGVVMKREPFYCKTWQLSIHHKTTDGREFIALYGEVDPSSIKVKVGESVSQGQLIAKSGVLLHDDGTPLTIVHGKNVSMLHFETYSGALGFDPNSKLNGKVLKNAFQRREDLMDSVDILQEGYRAVFLDAPPLPPVGNRIPIAQLKLSERGKDFIKGWEGVHLDKTKENTYYYDDSKGYCTVGWGHLIQEASCSASGYIAMSSKIPVADAKKLFDDDVAVIEGRVRNAITVPLYQHEYDALVSLAFNLGSLSKTPNLRAKLNKCDYAGAPKEFLDIENEKRRKREYDMFCQGVYNSAH
    

Molecular Weight62918.76 Da

Isoelectric Point (pI)8.91

Net Charge (pH 7.0)10.41

Net Charge (pH 7.4) 8.81

Charge Density (pH 7.0) 0.0183

GRAVY Index-0.50

Hydrophobic Moment 0.67

Boman Index-0.05

Instability Index27.05

Aliphatic Index 79.31

Aromaticity 0.0792

Extinction Coeff. Reduced 65780.00

Extinction Coeff. Oxidized 66155.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0246734 VERIFIED: NO

Provenance & Taxonomy

OrganismBurkholderia ubonensis [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Bacteriolytic enzyme Non-hemolytic Non-ribosomal