Peptide Database

Peptide NameS-type pyocin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length131 amino acids

Chemical FormulaC648H991N165O201

DescriptionStandard

        AFSDLPKVRVRTFTYNALNNSYEFIRDGESTPALIWTPIAQPADSSTSSPAGPPALPKDPGNVVTPFVPELEAYPAIDRDDPDDYILISPIDSGLPNSYLLFKDPRSIPGVASGFGERITNTWLDARETLK
    

Molecular Weight14308.79 Da

Isoelectric Point (pI)4.40

Net Charge (pH 7.0)-7.18

Net Charge (pH 7.4) -7.40

Charge Density (pH 7.0) -0.0548

GRAVY Index-0.34

Hydrophobic Moment 0.59

Boman Index0.04

Instability Index38.45

Aliphatic Index 81.22

Aromaticity 0.0992

Extinction Coeff. Reduced 18450.00

Extinction Coeff. Oxidized 18450.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 5764.86

LogP -57.73

H-bond Donors 193.0

H-bond Acceptors 194.0

Rotatable Bonds 438.0

Heavy Atoms 1014.0

Ring Count 32.0

Amide Bonds 137.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0350591 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas savastanoi [Bacterium]

FamilyPyocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Non-hemolytic Non-ribosomal