Peptide Database

Peptide NamePeptide chain B in PDB 1JDH

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length38 amino acids

Chemical FormulaC171H277N47O71

DescriptionStandard

        LGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLV
    

Molecular Weight4127.30 Da

Isoelectric Point (pI)4.09

Net Charge (pH 7.0)-7.22

Net Charge (pH 7.4) -7.44

Charge Density (pH 7.0) -0.1900

GRAVY Index-0.93

Hydrophobic Moment 0.47

Boman Index-0.20

Instability Index37.56

Aliphatic Index 74.47

Aromaticity 0.0263

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1961.16

LogP -25.99

H-bond Donors 66.0

H-bond Acceptors 64.0

Rotatable Bonds 148.0

Heavy Atoms 289.0

Ring Count 1.0

Amide Bonds 40.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0347940 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 1JDH receptor chain A

MethodProtein-peptide complex structure