Peptide Database

Peptide NameLysin A

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Bacteriolytic activity ▸ Bacteriolytic enzyme

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length1063 amino acids

Chemical FormulaC5241H7958N1462O1537S21

DescriptionStandard

        MADRIGIDFSAAQIDPAAIKAAGVSAVINYLSEARPSAPWMKAVKPMSRDYAARLQASGIEVVSNYQYGKTGDPSQPDWKGGYEAGKRHGRIALDNHWKANGTPWRPCYAPCDDNPTQDEVVNLVLPFIKGWAEVWGKEWTGIYCNRQTWEILKAHNAPVTWLFQHFWDGGSGDKRARIHPDAHIAQIRIDQDKVGGVGVDWNLLLKPDYGQWSLSRNPNPVETFPIRNLIKTSGVGYNSGNNGRLRIYIHSSEGKDWVSTAVGTMQYQASSQSGSYHYLIDDNEIIQTVALNNSAWAVLSDNNVSVNICLVISSGASGYGVTARENQPKTKAQWLEHEKMLKMLRFLVDHVCRETGIPKTRVDIVGVGLNRRGVSSHNNYTYGSVKLKGFKDGTHWDIPDTFPFENILSDGNVIPLPPPDPDAFPLPQGYYYGPLDGPEQSISGRAGEQRSWIDGLKRWQKAVGIPQTGVWDKATENIARVLQAEKKWPNSRGYVYKGEWDAVIREGWQPPPPPKLPDLPTTPAPAPSNPSPSPEFIMEKPSARRCMPLAEGTYRWGSPFGNRDGGFHNGQDFENVPNTASVPVFASQAGTVIFSGAAQGYGGPSPAGWVVVDSDDEQGGGCVEYAHIIAEVAKGAQVRAGQRIGRINTNPATYGDSTGPHLHMRVWEREYGGRGIDPKAWLNGASRIINGATKPVTPAPAPQEPGKPAEKPQEVPFSMGRKLADITGPLLSDRWKVTATDLGIPISLTTGELLFIFGDTFAGTKVGSADWRSPVGLVGRGSVDEAVKFTHAAGGDPNYARQFWKYTHDASPWRNGGFSTVLPTDVLRIGSDLYLHVMVNKGLGNVLWTEIWKSTNQGASWVHTGNLSKLDGAAHNGRAQCWAWEYDPTDDYVYVISDSFGRDSGIILRRVRPRSIADWRAYESWGWDGQAWKWGAANPTPITPGDEKWGELVLRRLPSGKWIIGGFLASKYNLSYRVVDSPTANMYTTPLQTPIVGTSWGAESHAEGKVAQLYGGYILPGSELDKENGVGIIVSQWKTDSGWPYKAMQFQATLRTNPEGAS
    

Molecular Weight116711.49 Da

Isoelectric Point (pI)7.33

Net Charge (pH 7.0)1.44

Net Charge (pH 7.4) -0.26

Charge Density (pH 7.0) 0.0014

GRAVY Index-0.48

Hydrophobic Moment 0.77

Boman Index0.02

Instability Index34.27

Aliphatic Index 71.67

Aromaticity 0.1035

Extinction Coeff. Reduced 305610.00

Extinction Coeff. Oxidized 306110.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0016259 VERIFIED: NO

Provenance & Taxonomy

OrganismGordonia phage Chidiebere [Virus]

Structure & Mods

Configlinear polypeptide/propeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Bacteriolytic enzyme Non-hemolytic Non-ribosomal

RECORD: Rec_0112932 VERIFIED: NO