Peptide Database

Peptide NameUGPI1_ARATH

Function Ontology

Neurological / Signaling ▸ Signaling peptide

Standard StatusStandard

Sequence Length189 amino acids

Chemical FormulaC917H1461N237O276S9

DescriptionStandard

        IMQVCFPKHDKNPDLSNFNSVVLKNLNDSKITGIGIGSGDIWVVVILTTNKNENAECLADEVVDQLKNQPCTNTNNSAPVPGNNLLAKCSLNTTVVRDGVMAISKLHLLCLLSVFLSLHRLVLSGTDGEDDLLLTVFNKYRTGLNLKTLTTPEGGYSLLTTTNSGAYAFGVNGLVSSSFLFLLFCFFMF
    

Molecular Weight20510.42 Da

Isoelectric Point (pI)5.87

Net Charge (pH 7.0)-2.03

Net Charge (pH 7.4) -2.50

Charge Density (pH 7.0) -0.0107

GRAVY Index0.24

Hydrophobic Moment 0.61

Boman Index0.17

Instability Index15.12

Aliphatic Index 106.14

Aromaticity 0.0794

Extinction Coeff. Reduced 9970.00

Extinction Coeff. Oxidized 10345.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 8224.41

LogP -102.40

H-bond Donors 284.0

H-bond Acceptors 286.0

Rotatable Bonds 678.0

Heavy Atoms 1439.0

Ring Count 25.0

Amide Bonds 210.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0256844 VERIFIED: YES

Provenance & Taxonomy

OrganismArabidopsis thaliana [Plant]

Tax ID3702

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Other ModsGPI-anchor related processing reported

Bio-Activity Profile

Function

Signaling