Peptide Database

Peptide NamePedA15.2

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length28 amino acids

Chemical FormulaC119H189N39O46S4

DescriptionStandard

        GAHANNMSCITGSKSCPNCKEAEREDYN
    

Molecular Weight3030.27 Da

Isoelectric Point (pI)5.53

Net Charge (pH 7.0)-1.18

Net Charge (pH 7.4) -1.48

Charge Density (pH 7.0) -0.0420

GRAVY Index-1.11

Hydrophobic Moment 0.40

Boman Index-0.24

Instability Index52.25

Aliphatic Index 24.64

Aromaticity 0.0357

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1615.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1405.56

LogP -21.73

H-bond Donors 50.0

H-bond Acceptors 50.0

Rotatable Bonds 101.0

Heavy Atoms 208.0

Ring Count 3.0

Amide Bonds 31.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0078384 VERIFIED: NO

Provenance & Taxonomy

OrganismPedobacter lusitanus NL19 [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial