Peptide Database

Peptide NameCycloviolacin VY1

Function Ontology

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Standard StatusStandard

Sequence Length30 amino acids

Chemical FormulaC140H229N39O40S6

DescriptionStandard

        CGESCVFIPCISTVIGCSCKNKVCYRNHII
    

Molecular Weight3290.94 Da

Isoelectric Point (pI)8.34

Net Charge (pH 7.0)1.79

Net Charge (pH 7.4) 1.44

Charge Density (pH 7.0) 0.0596

GRAVY Index0.67

Hydrophobic Moment 0.36

Boman Index0.19

Instability Index47.51

Aliphatic Index 94.00

Aromaticity 0.0667

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1865.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1265.68

LogP -13.34

H-bond Donors 50.0

H-bond Acceptors 49.0

Rotatable Bonds 106.0

Heavy Atoms 225.0

Ring Count 4.0

Amide Bonds 31.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0225954 VERIFIED: YES

Provenance & Taxonomy

OrganismClitoria ternatea [Plant]

FamilyCyclotide

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

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TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)