Peptide Database

Peptide NamePeptide chain J in PDB 5L8R

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length42 amino acids

Chemical FormulaC231H345N51O56S

DescriptionStandard

        MRDLKTYLSVAPVASTLWFAALAGLLIEINRFFPDALTFPFF
    

Molecular Weight4764.58 Da

Isoelectric Point (pI)5.88

Net Charge (pH 7.0)-0.50

Net Charge (pH 7.4) -0.72

Charge Density (pH 7.0) -0.0118

GRAVY Index0.85

Hydrophobic Moment 0.64

Boman Index0.37

Instability Index50.70

Aliphatic Index 111.67

Aromaticity 0.1905

Extinction Coeff. Reduced 6990.00

Extinction Coeff. Oxidized 6990.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1672.03

LogP -6.37

H-bond Donors 58.0

H-bond Acceptors 57.0

Rotatable Bonds 145.0

Heavy Atoms 339.0

Ring Count 12.0

Amide Bonds 42.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0369184 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5L8R receptor chain F

MethodProtein-peptide complex structure