Peptide Database

Peptide NamePeptide chain F in PDB 5DX0

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length8 amino acids

Chemical FormulaC39H72N14O10

DescriptionStandard

        GKAPRKQL
    

Molecular Weight897.08 Da

Isoelectric Point (pI)11.17

Net Charge (pH 7.0)2.76

Net Charge (pH 7.4) 2.55

Charge Density (pH 7.0) 0.3448

GRAVY Index-1.52

Hydrophobic Moment 0.51

Boman Index-0.51

Instability Index42.34

Aliphatic Index 61.25

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 415.26

LogP -4.22

H-bond Donors 14.0

H-bond Acceptors 13.0

Rotatable Bonds 31.0

Heavy Atoms 63.0

Ring Count 1.0

Amide Bonds 8.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0207117 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5DX0 receptor chain A

MethodProtein-peptide complex structure