Peptide Database

Peptide NamePeptide chain X in PDB 5V2C

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length40 amino acids

Chemical FormulaC196H327N47O52S

DescriptionStandard

        MTITPSLKGFFIGLLSGAVVLGLTFAVLIAISQIDKVQRS
    

Molecular Weight4206.04 Da

Isoelectric Point (pI)9.99

Net Charge (pH 7.0)1.50

Net Charge (pH 7.4) 1.28

Charge Density (pH 7.0) 0.0375

GRAVY Index1.16

Hydrophobic Moment 0.60

Boman Index0.42

Instability Index22.12

Aliphatic Index 143.75

Aromaticity 0.0750

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1568.46

LogP -11.35

H-bond Donors 55.0

H-bond Acceptors 55.0

Rotatable Bonds 140.0

Heavy Atoms 296.0

Ring Count 4.0

Amide Bonds 41.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0100843 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5V2C receptor chain D

MethodProtein-peptide complex structure