Peptide Database

Peptide NamePeptide chain C in PDB 4NY3

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length5 amino acids

Chemical FormulaC33H43N5O9

DescriptionStandard

        PDYFL
    

Molecular Weight653.72 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-1.04

Net Charge (pH 7.4) -1.10

Charge Density (pH 7.0) -0.2083

GRAVY Index0.04

Hydrophobic Moment 0.39

Boman Index0.35

Instability Index-7.08

Aliphatic Index 78.00

Aromaticity 0.4000

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 223.26

LogP 0.47

H-bond Donors 8.0

H-bond Acceptors 8.0

Rotatable Bonds 17.0

Heavy Atoms 47.0

Ring Count 3.0

Amide Bonds 4.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0029029 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 4NY3 receptor chain A

MethodProtein-peptide complex structure