Peptide Database

Peptide NamePeptide chain D in PDB 5MCQ

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length17 amino acids

Chemical FormulaC80H112N18O25

DescriptionStandard

        GGGYPYFIPGGEVNVAE
    

Molecular Weight1725.85 Da

Isoelectric Point (pI)4.24

Net Charge (pH 7.0)-2.23

Net Charge (pH 7.4) -2.44

Charge Density (pH 7.0) -0.1312

GRAVY Index-0.05

Hydrophobic Moment 0.18

Boman Index0.37

Instability Index27.32

Aliphatic Index 62.94

Aromaticity 0.1765

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 2980.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 669.49

LogP -5.55

H-bond Donors 21.0

H-bond Acceptors 23.0

Rotatable Bonds 49.0

Heavy Atoms 123.0

Ring Count 5.0

Amide Bonds 17.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0155329 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5MCQ receptor chain A

MethodProtein-peptide complex structure