Peptide Database

Peptide NameGarvicin KC, GakC

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial

Standard StatusStandard

Sequence Length32 amino acids

Chemical FormulaC143H240N38O36S

DescriptionStandard

        MGAIIKAGAKIVGKGALTGGGVWLAEKLFGGK
    

Molecular Weight3099.73 Da

Isoelectric Point (pI)10.18

Net Charge (pH 7.0)3.50

Net Charge (pH 7.4) 3.27

Charge Density (pH 7.0) 0.1093

GRAVY Index0.59

Hydrophobic Moment 0.63

Boman Index0.35

Instability Index-6.72

Aliphatic Index 106.88

Aromaticity 0.0625

Extinction Coeff. Reduced 5500.00

Extinction Coeff. Oxidized 5500.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1168.84

LogP -8.59

H-bond Donors 41.0

H-bond Acceptors 41.0

Rotatable Bonds 108.0

Heavy Atoms 218.0

Ring Count 3.0

Amide Bonds 31.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0314189 VERIFIED: YES

Provenance & Taxonomy

OrganismLactococcus garvieae KS1546 [Bacterium]

FamilyBacteriocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibacterial

TargetLactococcus lactis subsp. lactis IL1403

Activity6 μM

MethodIC50