Peptide Database

Peptide NamepdBD-2

Function Ontology

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Standard StatusStandard

Sequence Length42 amino acids

Chemical FormulaC220H327N69O57S6

DescriptionStandard

        EVQIQNWTCGYGGLCRRFCFDQEYIVAHHGCPRRYRCCAVRF
    

Molecular Weight5042.77 Da

Isoelectric Point (pI)8.68

Net Charge (pH 7.0)2.95

Net Charge (pH 7.4) 2.59

Charge Density (pH 7.0) 0.0703

GRAVY Index-0.34

Hydrophobic Moment 0.52

Boman Index-0.11

Instability Index27.87

Aliphatic Index 53.33

Aromaticity 0.1667

Extinction Coeff. Reduced 9970.00

Extinction Coeff. Oxidized 10345.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 2057.36

LogP -18.90

H-bond Donors 80.0

H-bond Acceptors 68.0

Rotatable Bonds 159.0

Heavy Atoms 352.0

Ring Count 11.0

Amide Bonds 45.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0251589 VERIFIED: YES

Provenance & Taxonomy

OrganismDanio rerio [Animal]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)