Peptide Database

Peptide Namecycloviolacin Y1

Function Ontology

Antiparasitic ▸ Anthelminthic

Antiparasitic ▸ Anthelminthic ▸ Nematicidal activity

Standard StatusStandard

Sequence Length32 amino acids

Chemical FormulaC142H198N34O48S5

DescriptionStandard

        GGTIFDGETCFLGTCYTPGCSCGNYGFCYGTN
    

Molecular Weight3309.61 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-2.29

Net Charge (pH 7.4) -2.57

Charge Density (pH 7.0) -0.0715

GRAVY Index0.07

Hydrophobic Moment 0.25

Boman Index0.27

Instability Index1.96

Aliphatic Index 24.38

Aromaticity 0.1875

Extinction Coeff. Reduced 4470.00

Extinction Coeff. Oxidized 4720.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1299.48

LogP -17.71

H-bond Donors 50.0

H-bond Acceptors 51.0

Rotatable Bonds 98.0

Heavy Atoms 229.0

Ring Count 7.0

Amide Bonds 33.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0250221 VERIFIED: YES

Provenance & Taxonomy

OrganismViola odorata [Plant]

FamilyCyclotide

Tax ID97441

Structure & Mods

Confighead-to-tail cyclic peptide [Cyclic]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Nematocidal Anthelmintic

TargetHaemonchus contortus

RECORD: Rec_0423991 VERIFIED: YES