Peptide Database

Peptide NamePeptide chain D in PDB 4USL

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length6 amino acids

Chemical FormulaC29H36N6O9

DescriptionStandard

        GYYPGG
    

Molecular Weight612.63 Da

Isoelectric Point (pI)5.52

Net Charge (pH 7.0)-0.24

Net Charge (pH 7.4) -0.45

Charge Density (pH 7.0) -0.0403

GRAVY Index-0.90

Hydrophobic Moment 0.12

Boman Index0.35

Instability Index55.88

Aliphatic Index 0.00

Aromaticity 0.3333

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 2980.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 240.49

LogP -1.88

H-bond Donors 8.0

H-bond Acceptors 9.0

Rotatable Bonds 14.0

Heavy Atoms 44.0

Ring Count 3.0

Amide Bonds 5.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0013122 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 4USL receptor chain A

MethodProtein-peptide complex structure