Peptide Database

Peptide NameSD2

Function Ontology

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Standard StatusStandard

Sequence Length34 amino acids

Chemical FormulaC150H242N52O53S4

DescriptionStandard

        GPVTVEARTCESQSHRFKGTCVRESNCANVCHNE
    

Molecular Weight3750.10 Da

Isoelectric Point (pI)6.90

Net Charge (pH 7.0)-0.09

Net Charge (pH 7.4) -0.46

Charge Density (pH 7.0) -0.0026

GRAVY Index-0.75

Hydrophobic Moment 0.50

Boman Index-0.23

Instability Index46.86

Aliphatic Index 40.00

Aromaticity 0.0294

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 250.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1726.85

LogP -25.89

H-bond Donors 64.0

H-bond Acceptors 59.0

Rotatable Bonds 123.0

Heavy Atoms 259.0

Ring Count 4.0

Amide Bonds 37.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0286962 VERIFIED: YES

Provenance & Taxonomy

OrganismArabidopsis lyrata [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)