Peptide Database

Peptide NameBnPRP1

Function Ontology

—

Standard StatusStandard

Sequence Length38 amino acids

Chemical FormulaC183H267N47O56S3

DescriptionStandard

        PPTQNPYGQPMAPPTQNPYDQPMAPPTQNPYGQPMAPP
    

Molecular Weight4117.55 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-1.04

Net Charge (pH 7.4) -1.11

Charge Density (pH 7.0) -0.0275

GRAVY Index-1.40

Hydrophobic Moment 0.26

Boman Index-0.03

Instability Index57.75

Aliphatic Index 7.89

Aromaticity 0.0789

Extinction Coeff. Reduced 4470.00

Extinction Coeff. Oxidized 4470.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1558.25

LogP -18.40

H-bond Donors 42.0

H-bond Acceptors 58.0

Rotatable Bonds 106.0

Heavy Atoms 289.0

Ring Count 17.0

Amide Bonds 46.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0138729 VERIFIED: YES

Provenance & Taxonomy

OrganismBrassica rapa [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibacterial

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)