Peptide Database

Peptide NameS-type Pyocin domain protein

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Enzyme / Catalytic activity ▸ Hydrolase

Enzyme / Catalytic activity ▸ Hydrolase ▸ Nuclease

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length546 amino acids

Chemical FormulaC2586H4050N702O808S11

DescriptionStandard

        MCRLIPCGNTDVTKIADPHSLALHEALMIEGGGDQYSDKELASYLPSSSYTPARIRDQLASGELVLLKEIPAVPVFRLISGSIVPAESASGAIAESALTALTTRFENKQPFRSGAAGQAHADSLSPPAKLDYTPEAPVIEPATAPLPPPVVISENFGLPPLGPKVFAKSCTRPSGDTDSNEGEEKASNFGTLAMLAPATVTSPGANGLRPLGLISGSAMRLAKGWAMAARVGASVLSTAASSVLLALWPSKLGDGTLYTEEELREMTEAAIRVRFHLHVDATGNLRVAGYHVNDSTGYKDRVPVAHAELKGENFEVVVDDDFTLVWYPDDSGHRPVVSTEYPADSGIDPYSILVTPIQEDGQEHSPPGYQQPFEDQVELIVSFPADSGIEPLYLVFQKRAGGDGASVLNKNSVATPAHNAANFAKHEELLSVTESANPLVESLRNSGQLPPNYVTKAQAVKQGWKPGKALGNSIPQGQIGGDVFQNATSILPSAPERVWYEADVGLDSSMTRVKQPGTRLLYSNDGLLYVTTDHYETVHMIGRWKN
    

Molecular Weight58254.75 Da

Isoelectric Point (pI)5.06

Net Charge (pH 7.0)-20.30

Net Charge (pH 7.4) -21.36

Charge Density (pH 7.0) -0.0372

GRAVY Index-0.23

Hydrophobic Moment 0.66

Boman Index0.07

Instability Index43.42

Aliphatic Index 84.54

Aromaticity 0.0678

Extinction Coeff. Reduced 58330.00

Extinction Coeff. Oxidized 58455.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0301177 VERIFIED: NO

Provenance & Taxonomy

OrganismMarinobacter nauticus [Bacterium]

FamilyPyocin/Colicin

Tax ID2743

Structure & Mods

Configgene-encoded linear polypeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antibiotic Antimicrobial Bacteriocin Hydrolase Nuclease Non-hemolytic Non-ribosomal