Peptide Database

Peptide NameMtDef4

Function Ontology

—

Standard StatusStandard

Sequence Length27 amino acids

Chemical FormulaC114H188N38O46S4

DescriptionStandard

        RTCESQSNSFKGTCVRDSNCATVCQTE
    

Molecular Weight2955.20 Da

Isoelectric Point (pI)6.28

Net Charge (pH 7.0)-0.27

Net Charge (pH 7.4) -0.54

Charge Density (pH 7.0) -0.0099

GRAVY Index-0.77

Hydrophobic Moment 0.46

Boman Index-0.28

Instability Index35.93

Aliphatic Index 25.19

Aromaticity 0.0370

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 250.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1415.84

LogP -24.44

H-bond Donors 54.0

H-bond Acceptors 50.0

Rotatable Bonds 99.0

Heavy Atoms 202.0

Ring Count 1.0

Amide Bonds 30.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0073968 VERIFIED: YES

Provenance & Taxonomy

OrganismSolanum lycopersicum [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)