Peptide Database

Peptide NameS-type Pyocin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length456 amino acids

Chemical FormulaC2214H3530N632O685S11

DescriptionStandard

        MGQPTEVSAKASVKSAKIDNNVLDPEPDSELDSKTETPREKIQRQRRERHEQSDKTWAYVQDNDARYAAHRAKILAMREATQANEPINKVFCKSSMLPFGKVSVGKNREKASSVGNIGIYAAGSMDAVAVGGLSTAALSRIAGVDLADIDGLSTAALSRIAGVGLVDIAGFAMQVVGPIGILLALSPTRMGDGTLYGDEDIQLLKGVETLIRFGFDSKGMIHGYHVDKTEIPKRSVNLVGNKFVVDLEPGLSIEWVPVSEEIAGTKILVNPIPNVDSHTIYIHPEHEQGKEFDNTYITPISETDPNDYILTFPPTTGLPPMYVVFQLRGPDGRYISSGEPKPLLDRPSLRAETKRQIQNTARKDVNGNFIDDKGNIISNRHYGHKPGFEHRRLVRAAEELGMSQAEFNDYVNANPDHFQIEDAKTNLSHKNEKPGNGELNKIKRHMKQFLKKQDEL
    

Molecular Weight50314.25 Da

Isoelectric Point (pI)6.26

Net Charge (pH 7.0)-4.30

Net Charge (pH 7.4) -5.33

Charge Density (pH 7.0) -0.0094

GRAVY Index-0.52

Hydrophobic Moment 0.87

Boman Index-0.05

Instability Index37.25

Aliphatic Index 82.13

Aromaticity 0.0614

Extinction Coeff. Reduced 28880.00

Extinction Coeff. Oxidized 28880.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0310278 VERIFIED: NO

Provenance & Taxonomy

OrganismPhotobacterium kishitanii [Bacterium]

FamilyPyocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Non-hemolytic Non-ribosomal