Peptide Database

Peptide NameLysozyme

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Bacteriolytic activity ▸ Bacteriolytic enzyme

Enzyme / Catalytic activity ▸ Hydrolase

Enzyme / Catalytic activity ▸ Hydrolase ▸ Glycosidase

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length178 amino acids

Chemical FormulaC837H1342N256O259S11

DescriptionStandard

        MDMKSRLSAAVITAILAGAGAEVILSQFLDEKEGNRLSAYQDAGGIWTICRGITRVNGAPVRQGMTLTAAQCSDLNAREAERAIAWVKRNIQVSLTEAQIAGIASFCPYNIGPARCFSSTFYKKLNEGDRKGACAEIRRWIFDGGRDCRQTRGQANGCYGQVERRAQESELTCWGLDE
    

Molecular Weight19487.88 Da

Isoelectric Point (pI)8.45

Net Charge (pH 7.0)2.46

Net Charge (pH 7.4) 2.08

Charge Density (pH 7.0) 0.0138

GRAVY Index-0.30

Hydrophobic Moment 0.80

Boman Index-0.05

Instability Index41.62

Aliphatic Index 76.91

Aromaticity 0.0730

Extinction Coeff. Reduced 27960.00

Extinction Coeff. Oxidized 28460.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 8403.05

LogP -96.59

H-bond Donors 305.0

H-bond Acceptors 273.0

Rotatable Bonds 657.0

Heavy Atoms 1363.0

Ring Count 20.0

Amide Bonds 194.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0427278 VERIFIED: NO

Provenance & Taxonomy

OrganismXenorhabdus cabanillasii JM26 [Bacterium]

FamilyGlycosyl hydrolase 24

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Bacteriolytic enzyme Glycosidase Hydrolase Non-hemolytic Non-ribosomal

MethodQualitative functional evidence