Peptide Database

Peptide NameLysozyme (EC 3.2.1.17)

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Bacteriolytic activity ▸ Bacteriolytic enzyme

Enzyme / Catalytic activity ▸ Hydrolase

Enzyme / Catalytic activity ▸ Hydrolase ▸ Glycosidase

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length164 amino acids

Chemical FormulaC788H1277N239O240S9

DescriptionStandard

        MSMSPSARTRMRSTEKDKYHYYNDMGKSKGHCTWGAGILAHRGVCTTEELGQAVSAKMVGLEFERRVLEAERAVRRNVTVELNQEQFDALCSLTYNAGPTGALKTYSYVNRNDFSGAAGNISKMIKVRIIEGGKARYVVAPGLIKRRAEESAPFRLDESSKAKK
    

Molecular Weight18227.61 Da

Isoelectric Point (pI)9.68

Net Charge (pH 7.0)9.75

Net Charge (pH 7.4) 9.29

Charge Density (pH 7.0) 0.0595

GRAVY Index-0.56

Hydrophobic Moment 0.70

Boman Index-0.14

Instability Index58.53

Aliphatic Index 67.87

Aromaticity 0.0732

Extinction Coeff. Reduced 15930.00

Extinction Coeff. Oxidized 16055.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 7829.02

LogP -88.39

H-bond Donors 283.0

H-bond Acceptors 262.0

Rotatable Bonds 623.0

Heavy Atoms 1276.0

Ring Count 20.0

Amide Bonds 173.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0256099 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudoduganella albidiflava [Bacterium]

FamilyLysozyme

Structure & Mods

Configlinear polypeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Bacteriolytic enzyme Glycosidase Hydrolase Non-hemolytic

MethodQualitative functional evidence